Open Recon | How it Works

SIEMENS Healthineers Open Recon How it Works OX Template Effective Date: 10 Aug 2021| HILS 2223 Effective Date: 03 Sep 2022| HOOD05162003299304 Effective Date 03 Sep 2022 | HOOD05162003299304 Unrestricted © Siemens Healthineers, 2022 Open Recon – How it Works SIEMENS Healthineers Table of Contents What is Open Recon? 3 Working with Containers 4 --- Recommendations 7 Addendum – Retro Recon 8 Siemens Protocol Managing 8 Clinical Examples 14 Sample Processing 10 Result Information 14 Printing Results 16 Daily Maintenance 18 Weekly Maintenance 19 Monthly Maintenance 20 As-Needed Maintenance 23 2 Effective Date: 03 Sep 2022| HOOD05162003299304 Unrestricted © Siemens Healthineers, 2022 What is Open Recon? SIEMENS Healthineers • Open Recon (Open Reconstruction) is a developer-friendly 1 2 open digital interface for co-creation and knowledge 3 4 exchange with partners and researchers. • The partner application will run within a container directly on the MaRS and is seamlessly integrated into the imaging and reconstruction chain. ... • It will appear as an additional tab on the Inline card and provide convenient access to options supported by Open Recon. Results are displayed in the user interface in the Graphical Slice Position (GSP) display and will appear in the DICOM database. Please note: The installation and usage of containers does not require an internet connection (outside of the hospital network). The installation can be performed via SRS (Smart Schematic overview Remote Services), if applicable, or using any USB device. 1 MR scanner 2 MaRS (Measurement and Reconstruction System) 3 ICE (Image Calculation Environment) infrastructure 4 Container infrastructure OOOO 3 Effective Date: 03 Sep 2022| HOOD05162003299304 Unrestricted © Siemens Healthineers, 2022 Working with Containers SIEMENS Healthineers 1 Reconstruction Containers • A reconstruction container is a standalone, executable package of software that includes everything needed to run an application, such as code, system tools, system libraries, and so on. This means that the application can run independently from one computing environment to another and can easily be deployed and updated. Purchased container algorithms including manuals are installed together with the Open Recon license by the Siemens Healthineers Service (either via SRS or local site visit) at any time and don't require an update of the Numaris software. • In addition, a container is delivered with the corresponding operator manual. You can find the manual as a PDF file in the Online Help (see next page). 4 Effective Date: 03 Sep 2022| HOOD05162003299304 Unrestricted © Siemens Healthineers, 2022 Working with Containers SIEMENS Healthineers SIEMENS http://novsim:8090/mediapdf/OpenRecon_SubtleMedicalImaging_subtlemr_V2.2.0/pdfs/OpenRecon_SubtleMedicallmagi . C Search ... Help forvsim x About Protected View: This file originated from a potentially unsafe location, and most features have been disabled to avoid potential security risks. ? Options v Brain Assist >> program Language EN * @ Info 7 Hey AIAIA . UGH | Dm SUBTLE MEDICAL Help X Your quicklinks Language EN Y i Info ? Help AIAIA # Light | Dark Library type Language Add to Categories t » progra Go back Go forward Operator Manual Online Help Your quicklinks SubtleMRT™ EU User Manual Release Information Routil OpenApps Content Addendum Subtract Search Library Quick Quide SubtleMedicalimaging subtlemr 2.2.0 PDF File File typ Language Add to * Categories syngo MR XA20 - Administration Portal HTML favorites Operator Manual syngo MR XA50 - Diagnostic MR Imaging - Operato HTML MAGNETOM - Online Help HTML Add Online Help syngo MR XA50 - Motion Correction with Kinetic Se. HTML syngo MR XA50 - MR Examination and Review - Op. Release Information Addin Configuration ... HTML MAGNETOM Family - Breast Biopsy Coils syngo MR .. HTML Add syngo MR XA50 - MR Reference Handbook - Adden. HTML OpenApps Content MAGNETOM Family - MR System and Coils syngo .. HTML Add Addendum MM Reading - VB60A - Quick Guide HTML Quick Guide Add SubtleMedicalimaging subtlemr 2.2.0 PDF % Add syngo MR XA20 - Administration Portal HTML Add Please note: syngo MR XA50 - Diagnostic MR Imaging - Operato. HTML Add The purchased container comes complete with the algorithm syngo MR XA50 - Motion Correction with Kinetic Se. HTML Add manual, which is added as a PDF file in all available languages and syngo MR XA50 - MR Examination and Review - Op. HTML Add H. syngo MR XA50 - MR Reference Handbook - Adden ... can be found in the Online Help. HTML Add 5 Effective Date: 03 Sep 2022| HOOD05162003299304 Unrestricted © Siemens Healthineers, 2022 Working with Containers SIEMENS Healthineers 2 Selecting a Container for Reconstruction • Ensure that the protocol is open. USER > head >> Brain Assist > program > t1_qtse_dark-fluid_sag_p2 ? General @ 4:38 min 0.7x0.7x4.0 mm3 1.00 • On your MR scanner, containers are available for the protocol opened. 4Auto@ 2 Protocol Parameters Routine Contrast Resolution Geometry System Physio Inline Sequence Voice Commands Subtraction MIP Open Recon Execution Composing 1. Open the Inline/Open Recon parameter card. Image Management Algorithm None Auto Load 2. From the Algorithm list, select a container. Copy References Preview A tooltip including detailed information about the container will be displayed USER >> head >> Brain Assist >> program >> t1_qtse_dark-fluid_sag_p2 ? if you move the mouse pointer over the Algorithm parameter. General 4:38 min Auto @ 2 0.7x0.7x4.0 mm3 9 1.00 H. Protocol Parameters Routine Contrast Resolution Geometry System Physio Inline Sequence Voice Commands Execution Subtraction MIP Composing Open Recon Containers may offer additional algorithms and parameters, such as strength of Image Management Algorithm SubtleMR V1 image filter. Auto Load Copy References Preview 3. Select additional settings from the Preset list. Preset denoise Free Text denoise 4. To set more specific parameters, use the Free Text input field. To enlarge the input denoise-enhanced-level1 denoise-enhanced-level2 field, click the [...] button next to Free Text. super-resolution smooth-super-resolution edge-super-resolution 5. Save your selection. The selected reconstruction container and its parameters are super-resolution-gre-mpr super-resolution-dwi stored in the protocol and can be transferred to other MR scanners. If no container is installed on the target MR scanner, the protocol parameters for Open Recon are set to None. 6 Effective Date: 03 Sep 2022| HOOD05162003299304 Unrestricted © Siemens Healthineers, 2022 Recommendations SIEMENS Healthineers Please note: Consult the operator manual of the third-party container for information about which MR pulse sequences can be used. Please also observe the cautions and constraints described there. H. The execution time for image reconstruction cannot be guaranteed for third-party software components for image reconstruction or Caution image processing. The use of third-party software components for image reconstruction or image processing, such as with Open Recon technology, can affect system It is recommended not to use Open Recon algorithms in: performance and increase reconstruction time! • timing-critical examination steps like Stress, Care, or Test Bolus • navigator-gated examination steps Therefore, the availability of the reconstructed images can be delayed. • interventional or stimulus examinations • large reconstructions, for example GRASP or real-time TWIST When using a third-party algorithm on the Open Recon parameter card, perform test imaging prior to time-critical imaging to assess system performance. 7 Effective Date: 03 Sep 2022| HOOD05162003299304 Unrestricted © Siemens Healthineers, 2022 Addendum – Retro Recon SIEMENS Healthineers Information for Experienced Retro Recon Users Port Term-Sintage Manter ants When Open Recon is used for reconstruction, in some cases Pronocci Name Patient Nasce Time Progress Raidfile Status Action Dota Publishor no other reconstruction can be executed in parallel. ME Hecoristructive's Bahn, Bob Maldi Name 19680123 7127/022 11:26:41 AM OK Med Nerwin Edit Protocol for Retrospective Reconstruction Routine Contrast Genmetry System Please note: It is not possible to run Retro Recon with Open Werklows Slice Group 1 Fol Read 300 mm Recon enabled while the system is performing a Parameters Sices Foy Phase 100.0 % reconstruction and vice versa. Before starting a Retro Recon Q Slice Thickness 8.0 mm with Open Recon enabled, make sure that no other Uistance Factor 2000.0 - ms . DICOM reconstructions are still being performed. If a reconstruction HEADER TE 1:20 In IRIS Orientation Transversal is still in progress, wait until the Retro Recon starts. MEAS Phase Encoding Dir, Abo-Y Concatenations . Overtilecor Selection As a result, the recommended workflow of a specific Phase Oversampling AutoWign algorithm should be acquired as follows: YAPS Coil Chements DC Prerequisites: Presets ✓ Perform measurement with the Open Recon algorithm Parameter Name Original Current SLETHLIER OpenReconSelection.Ima. *activated*. (Activation in RetroRecon is not supported.) S COILCOMIIISEMODE 5 DISTORTIONCORRECTIONFILTER ✓ In Retro Recon, select the measurement you want to have S DOONSWAP 5 DYNAMICDISTORTIONCORRECTIONEITER reconstructed without the algorithm applied. S ELLIPFK ALFILTER 5 IMAGECOMMENT 1. 1a Under Parameters you will find 5 IMAGEFILTER OpenReconSelection as depicted in the right SUIMAGESCALECCHRECTION Please take care that al results created with RetroRecon might not be suited for diagnostic use any more. Results need to be checked carefully image. Parameter chengjes are not checked for consistency hence preparation oit reconstruction errors might oocus, Server Status: online Rald Status online USB Ortve not present 8 Effective Date: 03 Sep 2022| HOOD05162003299304 Unrestricted © Siemens Healthineers, 2022 Addendum – Retro Recon SIEMENS Healthineers Information for Experienced Retro Recon Users 1. 1b From there, add ImageId to the parameters to edit as depicted in the left image below. Short Term Storage Maintenance MeasUid Protocol Name Patient Name Time Progress Raidfile Status Action Data Publisher Y MR Reconstructions 15 t1_se_cor_denoise Open, Recon, 19330825 8/25/2022 6:28:20 AM OK Media Edit Protocol for Retrospective Reconstruction Routine Contrast Resolution Geometry System Physio Inline Sequence Network Subtraction MIP Composing Open Recon Print Parameters Workflows Algorithm SubtleMR V2 Q IRIS > MEAS 2. Preset denoise OpenReconSelection Add Free Text denoise Add AlgorithmName denoise-enhanced-level1 ... ExecutionDetails denoise-enhanced-level2 Id super-resolution smooth-super-resolution 1. Imageld edge-super-resolution Parameters FreeText Presets B1 FILTER Parameter Name Original Current S COILCOMBINEMODE OpenReconSelection.Ima ... mrc:37001/openrecon/subtlemedicalimaging/subtlemr@ ... mrc:37001/openrecon/subtlemedicalimaging/subtlemr@shi S_DISABLEOPENRECON S DISTORTIONCORRECTIONFILTER S DIXONSWAP Add S_DYNAMICDISTORTIONCORRECTIONFILTER S ELLIPTICALFILTER S IMAGECOMMENT - 1b Add ImageId to the parameters Please take care that all results created with RetroRecon might not be suited for diagnostic use any more. Results need to be checked carefully. Add Remove Save Parameter changes are not checked for consistency hence preparation or reconstruction errors might occur. X Start Cancel Server Status online Raid Status online USB Drive E: available space 4.8 of 7.3 GB Waiting for scan instructions. EN 6:35:11 AM 9 Effective Date: 03 Sep 2022| HOOD05162003299304 Unrestricted © Siemens Healthineers, 2022 Addendum – Retro Recon SIEMENS Healthineers Information for Experienced Retro Recon Users 1. 2 Edit the value of ImageId and remove the text from the Current value field so that the entry is empty as depicted in the right image below. There is no parameter dropdown list, so avoid typing errors in the parameter value. Now start the Retro Recon. Short Term Storage Maintenance MeasUid Protocol Name Patient Name Time Progress Raidfile Status Action Data Publisher Y